Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890218.1_cds_XP_016444890.1_39896
CDS Infomation

[gene=LOC107770134] [db_xref=GeneID:107770134] [protein=probable pectinesterase/pectinesterase inhibitor 59] [protein_id=XP_016444890.1] [location=join(26070..26967,29241..29935)] [gbkey=CDS]
Sequence

ATGACAATATATAAGTTCAATTCTTTACTACTCCTGTTCTTTTCTCTATCTTTGTTCCTA
CACCAATCTTTAGCAATTGATGAAGAAACAAGTAATGACATTAACTGGTGGTGTAGCAAA
ACTCCTCACCCCGAGCCATGTAAATACTTCATGTCCGGAGATTCTTTCAAACCCCAAAAC
AAATCCGAATTTCGAACAATGACAGTCCAAGTTGCATTGGATCATGTGATTCAAGTACAG
GCCCATGCAAAAAACGTAAGCCAATATTGCAGGGGAAAACGTAAGCAGTTAGTATGGATG
GATTGTGACAAGCTAATGGATGATACAGTTCTCCAATTAAACCGTAGTCTTGACGGGATT
AAATCAAATTCAAGTTCAGATTTTGATGCTCAAACTTGGCTTAGTGCATCTATGACAAAC
ATTGAAACATGTTTATCCGGATCAAATGACCTCAATGTTTCCAATATCCTACAGCCGAAT
TTGTCCACTAATGTTTCGCAGCTGATTAGTAACTGTTTGGCTATGAATGGGGAGTTCGTG
GACTGGGAAAATACAACACAAGTTGGTGGATTTCCAAATTGGCTCACGGCTAGTGAAAGA
GTGTTGTTACATTCCTCGTCGATAGATTTGATGGCTACGAAGGCTAATTATGTGGTGGCT
AAAGATAGATCGGGTCATTTTCGGTCTATTCAGTCTGCAATTAATTATGCAACTTCAAGA
AGAGTTGGAAATCAGAGGATTGTGATATACATCAAAAGGGGTGTTTATAGAGAGAATATA
TTGATAGGTCCAACTATGGGGAAGATTATGTTAGTTGGTGATGGCTTGAGATACACTGTA
ATCACAGGCAGCCGCAGTGTTGCTGCAGGTTACACAACTTACAGTACTGCAACTCTTGGG
GTGGACGGGATTGGATTCATTGCTCGAGGCATCACATTCCGAAACACAGCAGGGCCACAA
AATGGCCAAGCAGTAGCTCTTCGATCCGCATCAGATCTTTCAGTGTTCTACGGCTGTGGT
TTCGAAGGATACCAAGATACCCTTTTTGTCCAATCCCAACGTCAGTTCTACAAATCATGT
TATATCTACGGCACCATAGACTTCATCTTCGGCAACGCCGCAGTTGTTTTCCAAAATTGC
ATGATTTACGTTCGAAGGCCCTTATGGGGTCAAGTGAACGTAATCACAGCACAAGGCAGA
AACGACCCTTTTCAGAACACTGCAATTTCAATTCATAACTCTCGGATAATGGCAGCACCT
GATCTTCGGCCCGTGGTTCAGTCGTTTCAGACATATTTGGGACGTCCGTGGCAGCAATAT
TCAAGAACGATTATAATGAAGACTTATATTGACAGTTTAGTAAACCGAGCAGGTTGGTTA
ACTTGGTTAGATTCTAATTTTGCTTTGAGCACTTTGTACTATGCGGAATATGGTAATATT
GGACCAGCGGCTTCAACAAGGTATAGGGTGAAATGGCCTGGTTATCATGTGATAAAGAGT
GGTAATGTTGCTTCGAAATATACTGTTGCTAGCCTTATTGCTGGAAGGGCATGGCTGCCT
TCTACTGGTGTGCCATTCACTGCGGGGCTCTAA

Peptide Sequence

PEP ID

XP_016444890.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 59 [Nicotiana tabacum]
Sequence

MTIYKFNSLLLLFFSLSLFLHQSLAIDEETSNDINWWCSKTPHPEPCKYFMSGDSFKPQN
KSEFRTMTVQVALDHVIQVQAHAKNVSQYCRGKRKQLVWMDCDKLMDDTVLQLNRSLDGI
KSNSSSDFDAQTWLSASMTNIETCLSGSNDLNVSNILQPNLSTNVSQLISNCLAMNGEFV
DWENTTQVGGFPNWLTASERVLLHSSSIDLMATKANYVVAKDRSGHFRSIQSAINYATSR
RVGNQRIVIYIKRGVYRENILIGPTMGKIMLVGDGLRYTVITGSRSVAAGYTTYSTATLG
VDGIGFIARGITFRNTAGPQNGQAVALRSASDLSVFYGCGFEGYQDTLFVQSQRQFYKSC
YIYGTIDFIFGNAAVVFQNCMIYVRRPLWGQVNVITAQGRNDPFQNTAISIHNSRIMAAP
DLRPVVQSFQTYLGRPWQQYSRTIIMKTYIDSLVNRAGWLTWLDSNFALSTLYYAEYGNI
GPAASTRYRVKWPGYHVIKSGNVASKYTVASLIAGRAWLPSTGVPFTAGL

Transcript Sequence

Gene sequence data has not been registered.